STRINGSTRING
PITG_06852 protein (Phytophthora infestans) - STRING interaction network
"PITG_06852" - ATP-binding Cassette in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_06852ATP-binding Cassette (ABC) Superfamily (612 aa)    
Predicted Functional Partners:
PITG_06538
ATP-binding Cassette (ABC) Superfamily (166 aa)
   
 
0.817
PITG_09555
Ubiquitin-ribosomal fusion protein, putative (128 aa)
     
  0.739
PITG_09211
Putative uncharacterized protein (3898 aa)
   
  0.657
PITG_15731
ATP-binding Cassette (ABC) Superfamily (1348 aa)
     
  0.615
PITG_06109
ATP-binding Cassette (ABC) Superfamily (987 aa)
     
  0.615
PITG_06288
Protein kinase (870 aa)
   
  0.568
PITG_16808
ATP-binding Cassette (ABC) Superfamily (1012 aa)
 
0.561
PITG_18940
ATP-binding Cassette (ABC) Superfamily (633 aa)
       
  0.555
PITG_18289
ATP-binding Cassette (ABC) Superfamily (258 aa)
       
  0.555
PITG_09882
ATP-binding Cassette (ABC) Superfamily (441 aa)
       
  0.555
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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