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PITG_07308 protein (Phytophthora infestans) - STRING interaction network
"PITG_07308" - rRNA 2'-O-methyltransferase fibrillarin, putative in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_07308rRNA 2’-O-methyltransferase fibrillarin, putative (326 aa)    
Predicted Functional Partners:
PITG_09432
Nucleolar protein NOP5 (519 aa)
   
  0.998
PITG_05534
Nucleolar protein Nop56 (514 aa)
 
  0.994
PITG_19608
Ribosomal protein L7Ae/L30e/S12e/Gadd4, putative (147 aa)
     
  0.992
PITG_03300
U4/U6 small nuclear ribonucleoprotein Prp31 (529 aa)
 
  0.986
PITG_18633
tRNA pseudouridine synthase B, putative (319 aa)
   
 
  0.985
PITG_06263
H/ACA ribonucleoprotein complex subunit 4 (480 aa)
   
 
  0.985
PITG_19178
13 kDa ribonucleoprotein-associated protein (128 aa)
     
  0.982
PITG_06991
FHA domain-interacting nucleolar phosphoprotein, putative (246 aa)
     
 
  0.980
PITG_00052
Periodic tryptophan protein 2 (908 aa)
     
  0.975
PITG_08338
Nucleolar protein 6, putative (1129 aa)
     
  0.975
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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