STRINGSTRING
PITG_07914 protein (Phytophthora infestans) - STRING interaction network
"PITG_07914" - Synaptobrevin-like protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_07914Synaptobrevin-like protein (199 aa)    
Predicted Functional Partners:
PITG_05592
Putative uncharacterized protein (219 aa)
     
  0.990
PITG_00665
Putative uncharacterized protein (196 aa)
     
  0.990
PITG_03790
Putative uncharacterized protein (232 aa)
     
  0.972
PITG_09548
Syntaxin-like protein (321 aa)
     
  0.964
PITG_03887
Putative uncharacterized protein (353 aa)
     
  0.964
PITG_00506
Syntaxin 7-like protein (271 aa)
     
  0.961
PITG_03252
Alpha-soluble NSF attachment protein, putative (293 aa)
     
  0.954
PITG_08016
Vesicle-trafficking protein SEC22b, putative (223 aa)
     
0.948
PITG_01853
Syntaxin-like protein (276 aa)
     
  0.942
PITG_01470
Syntaxin-like protein (301 aa)
     
  0.942
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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