STRINGSTRING
PITG_08028 protein (Phytophthora infestans) - STRING interaction network
"PITG_08028" - Cohesin subunit, putative in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_08028Cohesin subunit, putative (1397 aa)    
Predicted Functional Partners:
PITG_18049
Chromosome segregation protein, putative (1211 aa)
     
  0.986
PITG_05757
Structural maintenance of chromosomes protein, putative (1235 aa)
     
  0.982
PITG_08953
Double-strand-break repair protein rad21 (585 aa)
     
  0.976
PITG_03751
Nipped-B-like protein (1640 aa)
     
  0.923
PITG_19436
Sister chromatid cohesion protein PDS5 (1261 aa)
     
  0.891
PITG_10801
Sister chromatid cohesion protein PDS5 (1275 aa)
     
  0.891
PITG_02755
Structural maintenance of chromosomes protein 5, putative (1088 aa)
     
  0.866
PITG_17936
Structural maintenance of chromosomes protein 4, putative (1346 aa)
     
  0.861
PITG_22479
Putative uncharacterized protein (147 aa)
     
  0.850
PITG_21400
Protein kinase (323 aa)
     
  0.850
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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