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PITG_08211 protein (Phytophthora infestans) - STRING interaction network
"PITG_08211" - U2-associated splicing factor, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_08211U2-associated splicing factor, putative (907 aa)    
Predicted Functional Partners:
PITG_05411
Putative uncharacterized protein (254 aa)
     
    0.757
PITG_05126
Splicing factor 3A subunit, putative (244 aa)
       
    0.730
PITG_09604
Putative uncharacterized protein (775 aa)
     
    0.688
PITG_00852
Putative uncharacterized protein (179 aa)
     
    0.661
PITG_11805
Splicing factor, arginine/serine-rich, putative (214 aa)
     
 
  0.622
PITG_03763
Pre-mRNA-splicing factor SF2-like protein (184 aa)
     
 
  0.622
PITG_03028
Pre-mRNA-splicing factor SF2 (297 aa)
     
 
  0.622
PITG_03987
DEAD/DEAH box RNA helicase, putative (2091 aa)
     
    0.617
PITG_01528
Cell division cycle 5-related protein, putative (761 aa)
     
    0.615
PITG_06283
Beta-catenin-like protein (616 aa)
     
    0.613
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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