STRINGSTRING
PITG_08416 protein (Phytophthora infestans) - STRING interaction network
"PITG_08416" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_08416Putative uncharacterized protein (693 aa)    
Predicted Functional Partners:
PITG_00980
Nuclear cap-binding protein subunit, putative (892 aa)
     
  0.645
PITG_05126
Splicing factor 3A subunit, putative (244 aa)
     
    0.633
PITG_08831
Ribonuclease 3, putative (312 aa)
     
 
  0.633
PITG_10081
Putative uncharacterized protein (243 aa)
     
    0.608
PITG_08011
Pre-mRNA-splicing factor RSE1 (1197 aa)
     
    0.528
PITG_20384
Putative uncharacterized protein (207 aa)
     
    0.512
PITG_01479
Pre-mRNA-splicing factor prp46, putative (523 aa)
     
    0.478
PITG_13114
Elicitin-like protein (355 aa)
       
  0.437
PITG_23192
Small nuclear ribonucleoprotein F, putative (98 aa)
       
    0.424
PITG_11158
Pre-mRNA-splicing factor SYF1-like protein (887 aa)
     
 
    0.411
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (8%) [HD]