STRINGSTRING
PITG_08674 protein (Phytophthora infestans) - STRING interaction network
"PITG_08674" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_08674Putative uncharacterized protein (111 aa)    
Predicted Functional Partners:
PITG_19448
50S ribosomal protein L17, putative (146 aa)
     
 
    0.856
PITG_02494
Putative uncharacterized protein (129 aa)
     
 
  0.735
PITG_14729
30S ribosomal protein S16, putative (102 aa)
     
 
  0.733
PITG_11923
Mitochondrial 39-S ribosomal protein L47, putative (140 aa)
     
 
  0.711
PITG_15090
50S ribosomal protein L11 (144 aa)
     
    0.695
PITG_11045
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (115 aa)
     
 
    0.678
PITG_06636
Putative uncharacterized protein (178 aa)
     
 
  0.666
PITG_18330
Putative uncharacterized protein (298 aa)
     
 
  0.660
PITG_18054
50S ribosomal protein L7/L12, putative (178 aa)
     
 
  0.647
PITG_09345
40S ribosomal protein S5-2 (196 aa)
     
    0.645
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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