STRINGSTRING
PITG_08956 protein (Phytophthora infestans) - STRING interaction network
"PITG_08956" - DNA repair protein REV1 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_08956DNA repair protein REV1 (943 aa)    
Predicted Functional Partners:
PITG_02753
DNA polymerase (1223 aa)
     
  0.971
PITG_17977
Putative uncharacterized protein (178 aa)
       
  0.966
PITG_14397
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.961
PITG_18642
Putative uncharacterized protein (525 aa)
     
0.958
PITG_03713
DNA polymerase kappa, putative (601 aa)
     
0.956
PITG_09555
Ubiquitin-ribosomal fusion protein, putative (128 aa)
       
  0.849
PITG_15505
DNA polymerase (2403 aa)
     
  0.801
PITG_08326
DNA polymerase (1523 aa)
     
  0.797
PITG_20527
DNA polymerase (1609 aa)
     
  0.790
PITG_22611
Protein recA (131 aa)
   
  0.769
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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