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PITG_08997 protein (Phytophthora infestans) - STRING interaction network
"PITG_08997" - ATP-dependent RNA helicase DBP5, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_08997ATP-dependent RNA helicase DBP5, putative (458 aa)    
Predicted Functional Partners:
PITG_16006
Putative uncharacterized protein (508 aa)
     
  0.956
PITG_20384
Putative uncharacterized protein (207 aa)
     
 
  0.789
PITG_04842
Putative uncharacterized protein (1583 aa)
     
 
  0.708
PITG_09089
Exportin-6-like protein (1117 aa)
     
 
  0.700
PITG_07925
Exportin-5-like protein (1219 aa)
     
 
  0.700
PITG_00787
CRM1 C terminal Exportin 1-like protein (1076 aa)
     
 
  0.700
PITG_11743
Nuclear pore complex protein, putative (2054 aa)
     
 
  0.545
PITG_01259
Nuclear pore complex protein, putative (2487 aa)
       
 
  0.528
PITG_01257
Nucleoporin NUP85-like protein (666 aa)
       
 
  0.481
PITG_01082
Ran-specific GTPase-activating protein, putative (204 aa)
     
  0.450
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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