STRINGSTRING
PITG_09439 protein (Phytophthora infestans) - STRING interaction network
"PITG_09439" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_09439Putative uncharacterized protein (501 aa)    
Predicted Functional Partners:
PITG_02593
U3 small nucleolar ribonucleoprotein, putative (344 aa)
     
  0.993
PITG_14730
Nucleolar protein, putative (860 aa)
     
 
  0.963
PITG_02887
Ribosome biogenesis protein BMS1 (1192 aa)
     
 
  0.962
PITG_09432
Nucleolar protein NOP5 (519 aa)
     
  0.953
PITG_06667
U3 small nucleolar RNA-associated protein, putative (665 aa)
     
  0.953
PITG_07311
DEAD/DEAH box RNA helicase, putative (709 aa)
     
 
    0.952
PITG_02450
Ribosomal RNA assembly protein mis3; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (395 aa)
     
  0.951
PITG_13016
Pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (631 aa)
     
 
  0.949
PITG_19742
Putative uncharacterized protein (122 aa)
     
   
  0.931
PITG_08708
Putative uncharacterized protein (1005 aa)
     
   
  0.931
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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