STRINGSTRING
PITG_09786 protein (Phytophthora infestans) - STRING interaction network
"PITG_09786" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_09786Putative uncharacterized protein (157 aa)    
Predicted Functional Partners:
PITG_14399
Pre-mRNA-processing factor, putative (619 aa)
     
  0.630
PITG_21960
Putative uncharacterized protein (96 aa)
     
  0.614
PITG_03483
Splicing factor U2af large subunit, putative (569 aa)
     
  0.614
PITG_01867
Splicing factor U2af large subunit, putative (597 aa)
     
  0.614
PITG_19646
Pre-mRNA-processing factor 19, putative (524 aa)
     
  0.598
PITG_21398
DEAD/DEAH box RNA helicase, putative (1095 aa)
     
  0.590
PITG_09042
DEAD/DEAH box RNA helicase, putative (1049 aa)
     
  0.590
PITG_08995
Putative uncharacterized protein (219 aa)
     
  0.590
PITG_07744
DEAD/DEAH box RNA helicase, putative (1374 aa)
     
  0.590
PITG_18103
Poly(A) RNA polymerase, putative (489 aa)
     
  0.551
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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