STRINGSTRING
PITG_09862 protein (Phytophthora infestans) - STRING interaction network
"PITG_09862" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_09862Putative uncharacterized protein (716 aa)    
Predicted Functional Partners:
PITG_02887
Ribosome biogenesis protein BMS1 (1192 aa)
     
        0.597
PITG_01680
RNA-binding protein PNO1-like protein (234 aa)
     
      0.591
PITG_02193
Putative uncharacterized protein (255 aa)
     
        0.591
PITG_14248
rRNA-processing protein EBP2, putative (313 aa)
     
        0.565
PITG_02450
Ribosomal RNA assembly protein mis3; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (395 aa)
     
      0.506
PITG_03452
Putative uncharacterized protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (756 aa)
     
        0.493
PITG_18755
SDA1 family protein (594 aa)
     
        0.483
PITG_02420
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1179 aa)
     
        0.414
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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