STRINGSTRING
PITG_09866 protein (Phytophthora infestans) - STRING interaction network
"PITG_09866" - tRNA in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_09866tRNA (Adenine-N(1)-)-methyltransferase non-catalytic subunit trm6, putative (422 aa)    
Predicted Functional Partners:
PITG_05250
tRNA (Adenine-N(1)-)-methyltransferase catalytic subunit, putative (348 aa)
     
  0.990
PITG_08996
Putative uncharacterized protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (427 aa)
     
        0.930
PITG_10166
N(2),N(2)-dimethylguanosine tRNA methyltransferase, putative (542 aa)
     
 
  0.781
PITG_03818
U3 small nucleolar RNA-associated protein, putative (913 aa)
     
        0.780
PITG_06667
U3 small nucleolar RNA-associated protein, putative (665 aa)
     
        0.779
PITG_00165
Putative uncharacterized protein (340 aa)
     
      0.773
PITG_19671
N-acetyltransferase 10 (1102 aa)
     
        0.771
PITG_05314
tRNA (Guanine-N(7)-)-methyltransferase, putative (201 aa)
     
 
  0.765
PITG_01813
tRNA (Guanine-N(7)-)-methyltransferase, putative; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (209 aa)
     
 
  0.765
PITG_03308
Putative uncharacterized protein (566 aa)
     
        0.757
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (16%) [HD]