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PITG_09987 protein (Phytophthora infestans) - STRING interaction network
"PITG_09987" - tRNA pseudouridine synthase, putative in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_09987tRNA pseudouridine synthase, putative (481 aa)    
Predicted Functional Partners:
PITG_18056
Putative uncharacterized protein (262 aa)
     
      0.894
PITG_13615
Dimethyladenosine transferase, putative (349 aa)
   
   
  0.435
PITG_08045
Dimethyladenosine transferase (312 aa)
   
   
  0.435
PITG_18633
tRNA pseudouridine synthase B, putative (319 aa)
     
   
  0.408
PITG_06263
H/ACA ribonucleoprotein complex subunit 4 (480 aa)
     
   
  0.408
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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