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PITG_10018 protein (Phytophthora infestans) - STRING interaction network
"PITG_10018" - BCCIP family protein in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_10018BCCIP family protein (319 aa)    
Predicted Functional Partners:
PITG_14912
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (180 aa)
     
        0.930
PITG_16280
Glutamate synthase, putative (1193 aa)
       
      0.892
PITG_12037
Ferredoxin-dependent glutamate synthase, putative (1580 aa)
       
      0.892
PITG_01943
60S ribosomal protein L23 (141 aa)
     
 
  0.877
PITG_08996
Putative uncharacterized protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (427 aa)
     
        0.789
PITG_02450
Ribosomal RNA assembly protein mis3; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (395 aa)
     
        0.785
PITG_12678
Ribosome production factor 1, putative (354 aa)
     
        0.781
PITG_12292
rRNA-processing protein, putative (231 aa)
     
        0.760
PITG_05630
U3 small nucleolar ribonucleoprotein protein IMP4 (287 aa)
     
        0.728
PITG_08200
Neuroguidin-like protein (310 aa)
     
        0.724
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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