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PITG_10289 protein (Phytophthora infestans) - STRING interaction network
"PITG_10289" - DNA-directed RNA polymerase in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_10289DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1070 aa)    
Predicted Functional Partners:
PITG_04709
DNA ligase (3896 aa)
       
 
  0.744
PITG_13615
Dimethyladenosine transferase, putative (349 aa)
     
  0.687
PITG_08045
Dimethyladenosine transferase (312 aa)
     
  0.687
PITG_03514
DNA ligase (971 aa)
           
  0.653
PITG_19530
Putative uncharacterized protein (174 aa)
         
  0.598
PITG_17485
Putative uncharacterized protein (498 aa)
         
  0.598
PITG_16117
Putative uncharacterized protein (210 aa)
         
  0.598
PITG_13404
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1202 aa)
     
   
  0.512
PITG_14441
Cytoskeleton-associated protein, putative (1952 aa)
       
      0.474
PITG_10233
Putative uncharacterized protein (378 aa)
       
      0.474
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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