STRINGSTRING
PITG_10602 protein (Phytophthora infestans) - STRING interaction network
"PITG_10602" - DNA repair protein, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_10602DNA repair protein, putative (539 aa)    
Predicted Functional Partners:
PITG_02211
UV excision repair protein RAD23 (449 aa)
       
  0.963
PITG_21764
Caltractin (181 aa)
       
  0.946
PITG_17315
Putative uncharacterized protein (800 aa)
       
  0.946
PITG_13617
Caltractin (106 aa)
       
  0.946
PITG_13132
Caltractin (172 aa)
       
  0.946
PITG_12744
Caltractin-like protein (193 aa)
       
  0.946
PITG_02616
Caltractin (181 aa)
       
  0.946
PITG_03523
General transcription factor IIH subunit, putative (548 aa)
     
  0.924
PITG_09555
Ubiquitin-ribosomal fusion protein, putative (128 aa)
       
  0.888
PITG_18001
Ubiquitin, putative (175 aa)
       
  0.830
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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