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PITG_10871 protein (Phytophthora infestans) - STRING interaction network
"PITG_10871" - U1 small nuclear ribonucleoprotein C, putative in Phytophthora infestans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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PITG_10871U1 small nuclear ribonucleoprotein C, putative; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5’ splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5’ splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5’ splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates E complex formation by stabilizing the base pairing of the 5’ end of the U1 snRNA and the 5’ splice-site region (138 aa)    
Predicted Functional Partners:
PITG_05666
Small nuclear ribonucleoprotein E (79 aa)
     
  0.986
PITG_15653
Small nuclear ribonucleoprotein G (64 aa)
     
  0.980
PITG_18752
Small nuclear ribonucleoprotein-associated protein, putative (216 aa)
     
  0.976
PITG_07306
U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative (204 aa)
     
  0.973
PITG_09488
Small nuclear ribonucleoprotein Sm D3 (113 aa)
     
  0.971
PITG_20904
Small nuclear ribonucleoprotein Sm D1 (105 aa)
     
  0.967
PITG_23192
Small nuclear ribonucleoprotein F, putative (98 aa)
     
  0.948
PITG_13114
Elicitin-like protein (355 aa)
     
  0.892
PITG_12844
Putative uncharacterized protein (195 aa)
     
  0.876
PITG_02736
U2 small nuclear ribonucleoprotein A’, putative (329 aa)
     
  0.876
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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