STRINGSTRING
PITG_11088 protein (Phytophthora infestans) - STRING interaction network
"PITG_11088" - Putative uncharacterized protein in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_11088Putative uncharacterized protein (214 aa)    
Predicted Functional Partners:
PITG_17365
U3 small nucleolar RNA-associated protein, putative; Involved in nucleolar processing of pre-18S ribosomal RNA (250 aa)
     
 
    0.956
PITG_02193
Putative uncharacterized protein (255 aa)
     
        0.909
PITG_02450
Ribosomal RNA assembly protein mis3; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (395 aa)
     
  0.876
PITG_14248
rRNA-processing protein EBP2, putative (313 aa)
     
 
  0.854
PITG_01019
U3 small nucleolar RNA-associated protein, putative (902 aa)
     
 
    0.845
PITG_12292
rRNA-processing protein, putative (231 aa)
     
 
    0.839
PITG_01283
Glycoside hydrolase, putative (2307 aa)
     
 
    0.777
PITG_17155
RNA 3’-terminal phosphate cyclase, putative (594 aa)
     
 
  0.773
PITG_00410
Bystin (422 aa)
     
 
    0.772
PITG_14730
Nucleolar protein, putative (860 aa)
     
 
  0.767
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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