STRINGSTRING
PITG_11540 protein (Phytophthora infestans) - STRING interaction network
"PITG_11540" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_11540Putative uncharacterized protein (1158 aa)    
Predicted Functional Partners:
PITG_20502
Histone-lysine N-methyltransferase, putative (2943 aa)
     
  0.983
PITG_04185
Histone-lysine N-methyltransferase, putative (1659 aa)
     
  0.983
PITG_21175
Putative uncharacterized protein (165 aa)
     
  0.851
PITG_03359
Putative uncharacterized protein (353 aa)
     
  0.851
PITG_03423
Dynein heavy chain (4083 aa)
     
  0.743
PITG_01852
Dynein heavy chain (3693 aa)
     
  0.743
PITG_23160
Histone deacetylase, putative (1512 aa)
       
  0.734
PITG_11272
Histone demethylase, putative (1745 aa)
       
  0.734
PITG_00989
Histone demethylase, putative (621 aa)
       
  0.734
PITG_19210
SET domain-containing protein, putative (103 aa)
     
  0.734
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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