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PITG_11972 protein (Phytophthora infestans) - STRING interaction network
"PITG_11972" - Pre-mRNA-splicing factor 38A, putative in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_11972Pre-mRNA-splicing factor 38A, putative (199 aa)    
Predicted Functional Partners:
PITG_03569
Putative uncharacterized protein (405 aa)
     
 
  0.974
PITG_00194
Casein kinase II subunit, putative (348 aa)
     
      0.887
PITG_14198
Pre-mRNA-splicing factor 38B, putative (466 aa)
     
 
  0.819
PITG_06679
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (301 aa)
     
      0.720
PITG_02745
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (246 aa)
     
      0.720
PITG_02482
ATP-dependent RNA helicase DHX8 (1158 aa)
     
  0.688
PITG_19646
Pre-mRNA-processing factor 19, putative (524 aa)
     
 
  0.663
PITG_09488
Small nuclear ribonucleoprotein Sm D3 (113 aa)
     
 
  0.633
PITG_05935
DEAD/DEAH box RNA helicase, putative (823 aa)
     
 
  0.633
PITG_07306
U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative (204 aa)
     
  0.593
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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