STRINGSTRING
PITG_12105 protein (Phytophthora infestans) - STRING interaction network
"PITG_12105" - N-terminal kinase-like protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_12105N-terminal kinase-like protein (857 aa)    
Predicted Functional Partners:
PITG_11127
Coatomer subunit delta, putative (525 aa)
     
  0.681
PITG_12104
ATP-dependent DNA helicase 2 subunit, putative (607 aa)
 
            0.681
PITG_10105
Exportin-T, putative (1010 aa)
       
 
  0.533
PITG_04958
Coatomer subunit beta’ (1076 aa)
     
  0.508
PITG_03594
Protein transporter Sec31A, putative (1264 aa)
     
    0.443
PITG_04500
Nucleosome assembly protein 1 (367 aa)
       
      0.438
PITG_04957
AP-2 complex subunit sigma-1 (116 aa)
     
 
    0.437
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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