STRINGSTRING
PITG_12162 protein (Phytophthora infestans) - STRING interaction network
"PITG_12162" - RNA-binding protein, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_12162RNA-binding protein, putative (758 aa)    
Predicted Functional Partners:
PITG_02887
Ribosome biogenesis protein BMS1 (1192 aa)
     
 
  0.979
PITG_09374
Putative uncharacterized protein (975 aa)
     
 
  0.977
PITG_00052
Periodic tryptophan protein 2 (908 aa)
     
 
  0.948
PITG_07296
Nucleolar protein 10, putative (717 aa)
     
      0.945
PITG_00663
rRNA methyltransferase, putative; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (881 aa)
     
      0.938
PITG_13017
ATP-dependent RNA helicase, putative (1194 aa)
     
 
  0.937
PITG_08708
Putative uncharacterized protein (1005 aa)
     
   
0.933
PITG_15740
Putative uncharacterized protein (497 aa)
     
      0.932
PITG_12165
DEAD/DEAH box RNA helicase, putative (763 aa)
     
      0.932
PITG_03308
Putative uncharacterized protein (566 aa)
     
      0.932
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (8%) [HD]