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PITG_12291 protein (Phytophthora infestans) - STRING interaction network
"PITG_12291" - Pre-mRNA-processing factor 39, putative in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_12291Pre-mRNA-processing factor 39, putative (793 aa)    
Predicted Functional Partners:
PITG_01528
Cell division cycle 5-related protein, putative (761 aa)
     
 
  0.943
PITG_19646
Pre-mRNA-processing factor 19, putative (524 aa)
     
 
  0.929
PITG_07306
U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative (204 aa)
     
 
  0.921
PITG_14399
Pre-mRNA-processing factor, putative (619 aa)
     
 
  0.895
PITG_09956
Pre-mRNA-processing factor, putative (961 aa)
     
 
  0.846
PITG_08011
Pre-mRNA-splicing factor RSE1 (1197 aa)
     
 
  0.821
PITG_02996
Putative uncharacterized protein (130 aa)
     
 
  0.820
PITG_10969
Pre-mRNA-processing-splicing factor 8 (2320 aa)
     
 
  0.818
PITG_10871
U1 small nuclear ribonucleoprotein C, putative; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5’ splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5’ splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5’ splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates E complex formation by stabilizing the base pairing of the 5’ end of the U1 snRNA and the 5’ splice-site region (138 aa)
       
 
  0.796
PITG_07053
Putative uncharacterized protein (540 aa)
     
 
  0.779
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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