STRINGSTRING
PITG_12694 protein (Phytophthora infestans) - STRING interaction network
"PITG_12694" - Protein transport protein SEC13 in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_12694Protein transport protein SEC13 (309 aa)    
Predicted Functional Partners:
PITG_03594
Protein transporter Sec31A, putative (1264 aa)
     
  0.993
PITG_11743
Nuclear pore complex protein, putative (2054 aa)
     
  0.992
PITG_09965
Protein transport Sec23/Sec24-like protein (846 aa)
     
  0.991
PITG_12260
Protein transporter Sec24 (1023 aa)
     
  0.976
PITG_13151
Protein transporter Sec24 (1210 aa)
     
  0.969
PITG_01257
Nucleoporin NUP85-like protein (666 aa)
     
  0.963
PITG_05404
Putative uncharacterized protein (1098 aa)
     
  0.963
PITG_20611
Nucleoporin-like protein (345 aa)
   
0.951
PITG_02068
GTP-binding protein SAR1 (191 aa)
     
  0.936
PITG_01947
COPII coat assembly protein SEC16, putative (2641 aa)
       
  0.846
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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