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PITG_12843 protein (Phytophthora infestans) - STRING interaction network
"PITG_12843" - Rab proteins geranylgeranyltransferase component A, putative in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_12843Rab proteins geranylgeranyltransferase component A, putative (517 aa)    
Predicted Functional Partners:
PITG_13277
Putative uncharacterized protein (422 aa)
     
  0.852
PITG_04226
Geranylgeranyl transferase type-2 subunit alpha, putative (331 aa)
     
  0.852
PITG_04225
Geranylgeranyl transferase type-2 subunit alpha, putative (331 aa)
     
  0.852
PITG_04204
Geranylgeranyl transferase type-2 subunit alpha, putative (273 aa)
     
  0.852
PITG_22569
Geranylgeranyl transferase type-2 subunit beta (249 aa)
     
  0.830
PITG_03219
Geranylgeranyl transferase type-2 subunit beta (344 aa)
     
  0.830
PITG_18713
Rab6 family GTPase, putative (238 aa)
     
 
  0.755
PITG_17835
Putative uncharacterized protein (102 aa)
     
 
  0.672
PITG_03148
Rab7 family GTPase, putative (206 aa)
     
 
  0.672
PITG_11142
Protein farnesyltransferase/geranylgeranyltransferase, putative (413 aa)
     
  0.648
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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