STRINGSTRING
PITG_12871 protein (Phytophthora infestans) - STRING interaction network
"PITG_12871" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_12871Putative uncharacterized protein (823 aa)    
Predicted Functional Partners:
PITG_03955
U3 small nucleolar RNA-associated protein, putative (514 aa)
     
  0.991
PITG_00052
Periodic tryptophan protein 2 (908 aa)
     
  0.991
PITG_09374
Putative uncharacterized protein (975 aa)
     
  0.988
PITG_06667
U3 small nucleolar RNA-associated protein, putative (665 aa)
     
  0.987
PITG_00036
U3 small nucleolar RNA-associated protein 6 (671 aa)
     
  0.980
PITG_18014
Putative uncharacterized protein (1229 aa)
     
      0.977
PITG_20593
Putative uncharacterized protein (642 aa)
     
  0.975
PITG_00597
Putative uncharacterized protein (642 aa)
     
  0.975
PITG_11124
Nucleolar complex protein 4 (571 aa)
     
    0.970
PITG_03818
U3 small nucleolar RNA-associated protein, putative (913 aa)
     
  0.969
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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