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PITG_12943 protein (Phytophthora infestans) - STRING interaction network
"PITG_12943" - DNA excision repair ERCC-8-like protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_12943DNA excision repair ERCC-8-like protein (518 aa)    
Predicted Functional Partners:
PITG_01737
DNA damage-binding protein, putative (1150 aa)
       
  0.958
PITG_03561
COP9 signalosome complex subunit 5, putative (362 aa)
       
  0.735
PITG_18027
Histone acetyltransferase, putative (873 aa)
       
    0.692
PITG_08587
Histone acetyltransferase, putative (1186 aa)
       
    0.692
PITG_18716
DNA repair and recombination protein RAD26 (1039 aa)
     
  0.666
PITG_05259
DNA excision repair protein ERCC-6 (1052 aa)
     
  0.666
PITG_01976
DNA repair protein, putative (483 aa)
     
 
  0.663
PITG_01975
DNA repair protein, putative (329 aa)
     
 
  0.663
PITG_09555
Ubiquitin-ribosomal fusion protein, putative (128 aa)
         
  0.656
PITG_06199
Cullin family protein, putative (1017 aa)
       
  0.655
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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