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PITG_13500 protein (Phytophthora infestans) - STRING interaction network
"PITG_13500" - 40S ribosomal protein S4 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_1350040S ribosomal protein S4 (261 aa)    
Predicted Functional Partners:
PITG_10146
40S ribosomal protein S2 (263 aa)
 
  0.999
PITG_00631
Putative uncharacterized protein (67 aa)
   
  0.999
PITG_16008
40S ribosomal protein S27-like protein (82 aa)
   
  0.999
PITG_10887
40S ribosomal protein S11 (159 aa)
   
  0.999
PITG_08959
40S ribosomal protein S3-3 (246 aa)
   
  0.999
PITG_11766
40S ribosomal protein S3a (261 aa)
   
  0.999
PITG_09563
40S ribosomal protein S9-1 (192 aa)
   
  0.998
PITG_14850
40S ribosomal protein S7 (190 aa)
     
  0.998
PITG_02053
40S ribosomal protein S8 (213 aa)
     
  0.998
PITG_00443
40S ribosomal protein S6 (242 aa)
     
  0.998
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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