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PITG_15566 protein (Phytophthora infestans) - STRING interaction network
"PITG_15566" - RNA polymerase I-specific transcription initiation factor rrn3, putative in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_15566RNA polymerase I-specific transcription initiation factor rrn3, putative (787 aa)    
Predicted Functional Partners:
PITG_14613
Putative uncharacterized protein (231 aa)
     
  0.956
PITG_02420
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1179 aa)
     
  0.866
PITG_03855
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1811 aa)
     
  0.816
PITG_11365
Putative uncharacterized protein (429 aa)
     
  0.733
PITG_05854
Putative uncharacterized protein (107 aa)
     
  0.645
PITG_12304
TATA-box-binding protein, putative (163 aa)
       
  0.621
PITG_07312
TATA-box-binding protein (251 aa)
       
  0.621
PITG_06201
TATA-box-binding protein (220 aa)
       
  0.621
PITG_13404
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1202 aa)
     
  0.615
PITG_08173
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1166 aa)
     
  0.615
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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