STRINGSTRING
PITG_15621 protein (Phytophthora infestans) - STRING interaction network
"PITG_15621" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_15621Putative uncharacterized protein (779 aa)    
Predicted Functional Partners:
PITG_08016
Vesicle-trafficking protein SEC22b, putative (223 aa)
     
  0.894
PITG_07914
Synaptobrevin-like protein (199 aa)
     
  0.848
PITG_00651
Centromere/kinetochore protein, putative (736 aa)
     
  0.794
PITG_04958
Coatomer subunit beta’ (1076 aa)
     
  0.730
PITG_01044
DNA repair protein RAD50, putative (1280 aa)
     
 
  0.705
PITG_11127
Coatomer subunit delta, putative (525 aa)
     
  0.684
PITG_03549
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (910 aa)
     
  0.663
PITG_09211
Putative uncharacterized protein (3898 aa)
     
  0.548
PITG_14285
Vesicle-associated membrane protein, putative (223 aa)
     
  0.532
PITG_03166
Vesicle-associated membrane protein, putative (221 aa)
     
  0.532
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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