STRINGSTRING
PITG_16001 protein (Phytophthora infestans) - STRING interaction network
"PITG_16001" - Regulator of chromosome condensation in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_16001Regulator of chromosome condensation (RCC1), putative (1396 aa)    
Predicted Functional Partners:
PITG_18718
GTP-binding nuclear protein spi1; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (220 aa)
     
  0.802
PITG_03246
Putative uncharacterized protein (847 aa)
     
  0.762
PITG_01082
Ran-specific GTPase-activating protein, putative (204 aa)
     
  0.744
PITG_05404
Putative uncharacterized protein (1098 aa)
     
  0.694
PITG_09555
Ubiquitin-ribosomal fusion protein, putative (128 aa)
       
  0.694
PITG_11743
Nuclear pore complex protein, putative (2054 aa)
     
  0.665
PITG_03882
Histone H2A (140 aa)
       
  0.637
PITG_03881
Histone H2A (139 aa)
       
  0.637
PITG_10724
Putative uncharacterized protein (2596 aa)
     
  0.634
PITG_00262
Nuclear pore complex protein Nup93-like protein (911 aa)
     
 
  0.633
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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