STRINGSTRING
PITG_16012 protein (Phytophthora infestans) - STRING interaction network
"PITG_16012" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_16012Putative uncharacterized protein (206 aa)    
Predicted Functional Partners:
PITG_05126
Splicing factor 3A subunit, putative (244 aa)
     
  0.616
PITG_02482
ATP-dependent RNA helicase DHX8 (1158 aa)
     
    0.523
PITG_11457
Phosphoribosylformylglycinamidine synthase (1332 aa)
       
      0.437
PITG_11972
Pre-mRNA-splicing factor 38A, putative (199 aa)
     
    0.433
PITG_08211
U2-associated splicing factor, putative (907 aa)
     
    0.428
PITG_15575
Splicing factor 3B subunit 4 (188 aa)
     
    0.428
PITG_11417
U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, putative (274 aa)
       
    0.426
PITG_21960
Putative uncharacterized protein (96 aa)
     
    0.406
PITG_03483
Splicing factor U2af large subunit, putative (569 aa)
     
    0.406
PITG_01867
Splicing factor U2af large subunit, putative (597 aa)
     
    0.406
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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