STRINGSTRING
PITG_16138 protein (Phytophthora infestans) - STRING interaction network
"PITG_16138" - Exosome complex exonuclease RRP42-like protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_16138Exosome complex exonuclease RRP42-like protein (295 aa)    
Predicted Functional Partners:
PITG_09728
Exosome complex exonuclease RRP4 (342 aa)
 
  0.996
PITG_17106
Putative uncharacterized protein (171 aa)
 
  0.995
PITG_20903
Exosome complex exonuclease RRP40, putative (271 aa)
   
  0.992
PITG_14853
Exosome complex exonuclease MTR3-like protein (252 aa)
 
  0.990
PITG_17723
Putative uncharacterized protein (168 aa)
     
  0.988
PITG_15529
Exosome complex exonuclease RRP45-like protein (513 aa)
   
0.987
PITG_02564
Exosome complex exonuclease RRP6-like protein (1465 aa)
     
  0.985
PITG_07829
Exosome complex exonuclease RRP43, putative (283 aa)
   
0.984
PITG_15606
Exosome complex exonuclease RRP41-like protein (777 aa)
     
  0.971
PITG_18750
Putative uncharacterized protein (141 aa)
     
  0.969
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (7%) [HD]