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PITG_16313 protein (Phytophthora infestans) - STRING interaction network
"PITG_16313" - Vacuolar protein sorting-associated protein 53 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_16313Vacuolar protein sorting-associated protein 53 (699 aa)    
Predicted Functional Partners:
PITG_20200
Vacuolar protein sorting-associated protein, putative (727 aa)
     
  0.918
PITG_05667
Vacuolar protein sorting-associated protein, putative (1017 aa)
     
  0.913
PITG_00495
Fat-free family protein (820 aa)
     
  0.867
PITG_03609
Putative uncharacterized protein (1034 aa)
     
  0.706
PITG_18713
Rab6 family GTPase, putative (238 aa)
       
  0.687
PITG_10794
Conserved oligomeric Golgi complex subunit 6, putative (661 aa)
     
  0.672
PITG_00529
Conserved oligomeric Golgi complex subunit 8, putative (596 aa)
     
  0.671
PITG_01853
Syntaxin-like protein (276 aa)
     
  0.670
PITG_01470
Syntaxin-like protein (301 aa)
     
  0.670
PITG_16969
Conserved oligomeric Golgi complex subunit, putative (874 aa)
     
 
  0.650
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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