STRINGSTRING
PITG_16376 protein (Phytophthora infestans) - STRING interaction network
"PITG_16376" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_16376Putative uncharacterized protein (767 aa)    
Predicted Functional Partners:
PITG_12104
ATP-dependent DNA helicase 2 subunit, putative (607 aa)
     
0.983
PITG_03514
DNA ligase (971 aa)
     
  0.939
PITG_13158
Double-strand break repair protein, putative (863 aa)
     
  0.883
PITG_04709
DNA ligase (3896 aa)
     
  0.882
PITG_01044
DNA repair protein RAD50, putative (1280 aa)
     
  0.881
PITG_00828
Phosphatidylinositol kinase (PIK-5) (3432 aa)
     
  0.856
PITG_04614
DNA ligase, putative (497 aa)
     
  0.816
PITG_16527
Bloom syndrome protein, DEAD/DEAH box helicase (400 aa)
     
  0.764
PITG_14828
ATP-dependent DNA helicase, putative (653 aa)
     
  0.764
PITG_10518
Bloom syndrome protein (1022 aa)
     
  0.764
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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