STRINGSTRING
PITG_16813 protein (Phytophthora infestans) - STRING interaction network
"PITG_16813" - Rio kinase in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_16813Rio kinase (476 aa)    
Predicted Functional Partners:
PITG_02593
U3 small nucleolar ribonucleoprotein, putative (344 aa)
     
 
  0.866
PITG_04584
Putative uncharacterized protein (277 aa)
   
   
 
0.823
PITG_02450
Ribosomal RNA assembly protein mis3; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (395 aa)
   
  0.822
PITG_01680
RNA-binding protein PNO1-like protein (234 aa)
   
  0.800
PITG_02887
Ribosome biogenesis protein BMS1 (1192 aa)
     
 
  0.753
PITG_13300
RNA-binding protein NOB1 (500 aa)
     
  0.739
PITG_00410
Bystin (422 aa)
     
  0.734
PITG_00052
Periodic tryptophan protein 2 (908 aa)
     
 
  0.722
PITG_03156
Pre-rRNA-processing protein TSR1 (829 aa)
     
 
  0.703
PITG_05226
Putative uncharacterized protein (500 aa)
     
        0.685
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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