STRINGSTRING
PITG_16824 protein (Phytophthora infestans) - STRING interaction network
"PITG_16824" - Polygalacturonase, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_16824Polygalacturonase, putative (360 aa)    
Predicted Functional Partners:
PITG_08863
Pectinesterase, putative (230 aa)
   
  0.536
PITG_08912
Pectinesterase (351 aa)
   
  0.527
PITG_19782
Glycoside hydrolase, putative (370 aa)
 
     
  0.500
PITG_11632
Glycoside hydrolase, putative (370 aa)
 
     
  0.499
PITG_18907
Pectinesterase (330 aa)
     
  0.428
PITG_08914
Pectinesterase (269 aa)
     
  0.428
PITG_08911
Pectinesterase (193 aa)
     
  0.428
PITG_08910
Pectinesterase (234 aa)
     
  0.428
PITG_08902
Pectinesterase (901 aa)
       
  0.428
PITG_06560
Pectinesterase (345 aa)
     
  0.428
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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