STRINGSTRING
PITG_16834 protein (Phytophthora infestans) - STRING interaction network
"PITG_16834" - Exodeoxyribonuclease in Phytophthora infestans
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second shell of interactors
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filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PITG_16834Exodeoxyribonuclease (362 aa)    
Predicted Functional Partners:
PITG_11082
Endonuclease III, HhH-GPD superfamily base excision DNA repair, putative; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (287 aa)
 
 
  0.950
PITG_14397
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
   
  0.884
PITG_00574
Endonuclease III-like, HhH-GPD superfamily base excision DNA repair enzyme, putative (259 aa)
     
  0.857
PITG_02753
DNA polymerase (1223 aa)
   
  0.758
PITG_18063
Bifunctional polynucleotide phosphatase/kinase, putative (430 aa)
   
 
  0.755
PITG_03624
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (389 aa)
     
  0.754
PITG_00686
Tyrosyl-DNA phosphodiesterase, putative (1123 aa)
     
 
  0.746
PITG_04709
DNA ligase (3896 aa)
   
 
  0.737
PITG_04614
DNA ligase, putative (497 aa)
   
 
  0.721
PITG_18891
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (312 aa)
     
  0.711
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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