STRINGSTRING
PITG_16878 protein (Phytophthora infestans) - STRING interaction network
"PITG_16878" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_16878Putative uncharacterized protein (158 aa)    
Predicted Functional Partners:
PITG_09555
Ubiquitin-ribosomal fusion protein, putative (128 aa)
     
  0.744
PITG_02022
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1719 aa)
     
  0.709
PITG_23159
HECT E3 ubiquitin ligase, putative (1737 aa)
     
  0.675
PITG_15118
Actin-like protein (93 aa)
     
  0.670
PITG_15117
Actin-1 (376 aa)
     
  0.670
PITG_15078
Actin-2 (375 aa)
     
  0.670
PITG_03874
Actin-like protein (450 aa)
     
  0.670
PITG_02462
Actin-like protein (408 aa)
     
  0.670
PITG_01607
Actin-like protein (403 aa)
     
  0.670
PITG_01555
Putative uncharacterized protein (364 aa)
     
  0.670
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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