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PITG_17617 protein (Phytophthora infestans) - STRING interaction network
"PITG_17617" - TFIIH basal transcription factor complex helicase XPB subunit in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_17617TFIIH basal transcription factor complex helicase XPB subunit (820 aa)    
Predicted Functional Partners:
PITG_15486
General transcription factor IIH subunit, putative (483 aa)
     
  0.986
PITG_15696
TFIIH basal transcription factor complex helicase subunit (763 aa)
     
  0.965
PITG_14596
Transcription initiation factor IIB, putative (308 aa)
     
  0.964
PITG_07745
Putative uncharacterized protein (316 aa)
     
  0.961
PITG_00220
General transcription factor IIH subunit, putative (293 aa)
     
  0.961
PITG_10081
Putative uncharacterized protein (243 aa)
     
  0.961
PITG_03523
General transcription factor IIH subunit, putative (548 aa)
     
  0.957
PITG_08403
Putative uncharacterized protein (458 aa)
     
  0.953
PITG_23065
General transcription factor IIH subunit, putative (164 aa)
     
  0.944
PITG_04645
Putative uncharacterized protein (115 aa)
       
  0.943
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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