STRINGSTRING
PITG_18237 protein (Phytophthora infestans) - STRING interaction network
"PITG_18237" - Replication factor C subunit 2 in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_18237Replication factor C subunit 2 (327 aa)    
Predicted Functional Partners:
PITG_03389
Replication factor C subunit 4 (339 aa)
   
0.998
PITG_05302
Replication factor C subunit 5 (353 aa)
   
0.993
PITG_19314
Replication factor C subunit 3 (352 aa)
     
0.993
PITG_14397
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
   
  0.978
PITG_16649
Chromosome transmission fidelity protein, putative (881 aa)
     
0.959
PITG_03838
Putative uncharacterized protein (572 aa)
     
  0.863
PITG_18696
Replication factor C subunit, putative (893 aa)
     
  0.861
PITG_17728
Putative uncharacterized protein (409 aa)
     
  0.861
PITG_07874
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1505 aa)
   
 
  0.859
PITG_07823
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (807 aa)
   
 
  0.859
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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