STRINGSTRING
PITG_18246 protein (Phytophthora infestans) - STRING interaction network
"PITG_18246" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_18246Putative uncharacterized protein (902 aa)    
Predicted Functional Partners:
PITG_13131
Nucleolar complex protein, putative (736 aa)
     
  0.996
PITG_13016
Pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (631 aa)
     
 
  0.994
PITG_03308
Putative uncharacterized protein (566 aa)
     
      0.992
PITG_12225
Nucleolar complex protein 3 (812 aa)
     
  0.988
PITG_16107
rRNA biogenesis protein rrp5 (1882 aa)
     
 
  0.985
PITG_00227
DEAD/DEAH box RNA helicase, putative (609 aa)
     
 
  0.977
PITG_08026
DEAD/DEAH box RNA helicase, putative (758 aa)
     
      0.977
PITG_15740
Putative uncharacterized protein (497 aa)
     
 
  0.975
PITG_02752
Ribosomal RNA methyltransferase nop2-like protein (645 aa)
     
 
  0.975
PITG_19742
Putative uncharacterized protein (122 aa)
     
 
  0.972
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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