STRINGSTRING
PITG_18251 protein (Phytophthora infestans) - STRING interaction network
"PITG_18251" - Peptide chain release factor 1 in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_18251Peptide chain release factor 1 (366 aa)    
Predicted Functional Partners:
PITG_15736
Putative uncharacterized protein (200 aa)
   
 
  0.943
PITG_10874
Methylase subunit of polypeptide release factor, putative (261 aa)
   
 
  0.943
PITG_12697
30S ribosomal protein S9 (328 aa)
 
 
  0.769
PITG_03420
50S ribosomal protein L13 (140 aa)
 
 
  0.760
PITG_12193
Ribosomal protein (266 aa)
 
  0.755
PITG_03768
50S ribosomal protein L4 (277 aa)
 
  0.722
PITG_04382
50S ribosomal protein L27 (131 aa)
 
 
  0.667
PITG_11734
50S ribosomal protein L3-2 (285 aa)
 
 
  0.657
PITG_19448
50S ribosomal protein L17, putative (146 aa)
   
 
  0.649
PITG_13735
Peptide chain release factor, putative (378 aa)
   
0.641
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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