STRINGSTRING
PITG_18330 protein (Phytophthora infestans) - STRING interaction network
"PITG_18330" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_18330Putative uncharacterized protein (298 aa)    
Predicted Functional Partners:
PITG_19448
50S ribosomal protein L17, putative (146 aa)
     
    0.983
PITG_03768
50S ribosomal protein L4 (277 aa)
     
    0.982
PITG_11923
Mitochondrial 39-S ribosomal protein L47, putative (140 aa)
     
  0.981
PITG_11734
50S ribosomal protein L3-2 (285 aa)
     
    0.979
PITG_04382
50S ribosomal protein L27 (131 aa)
     
    0.978
PITG_20116
50S ribosomal protein L15 (250 aa)
     
  0.975
PITG_20118
50S ribosomal protein L15 (250 aa)
     
  0.975
PITG_03420
50S ribosomal protein L13 (140 aa)
     
    0.974
PITG_06636
Putative uncharacterized protein (178 aa)
     
  0.964
PITG_08718
Putative uncharacterized protein (205 aa)
     
    0.956
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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