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PITG_18432 protein (Phytophthora infestans) - STRING interaction network
"PITG_18432" - Pre-mRNA cleavage complex II protein Clp1, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_18432Pre-mRNA cleavage complex II protein Clp1, putative (396 aa)    
Predicted Functional Partners:
PITG_10481
Putative uncharacterized protein (602 aa)
     
  0.939
PITG_12111
Putative uncharacterized protein (732 aa)
     
  0.877
PITG_07110
Cleavage and polyadenylation specificity factor subunit 3 (724 aa)
     
  0.866
PITG_06390
Putative uncharacterized protein (628 aa)
       
  0.866
PITG_22644
Putative uncharacterized protein (176 aa)
     
  0.835
PITG_18568
Putative uncharacterized protein (176 aa)
     
  0.835
PITG_18498
Putative uncharacterized protein (1744 aa)
     
  0.835
PITG_12330
Cleavage and polyadenylation specificity factor subunit, putative (1561 aa)
     
  0.835
PITG_14249
Putative uncharacterized protein (414 aa)
     
  0.805
PITG_19533
Cleavage and polyadenylation specificity factor subunit, putative (222 aa)
     
  0.802
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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