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PITG_18713 protein (Phytophthora infestans) - STRING interaction network
"PITG_18713" - Rab6 family GTPase, putative in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_18713Rab6 family GTPase, putative (238 aa)    
Predicted Functional Partners:
PITG_20200
Vacuolar protein sorting-associated protein, putative (727 aa)
     
  0.956
PITG_16854
Putative uncharacterized protein (1469 aa)
       
  0.953
PITG_03873
Rab GDP dissociation inhibitor alpha (462 aa)
     
 
  0.927
PITG_12825
GTP-binding protein Parf (467 aa)
     
  0.788
PITG_05831
Putative uncharacterized protein (137 aa)
     
  0.787
PITG_13825
Ras family GTPase, putative (205 aa)
   
0.786
PITG_12574
Rab2 family GTPase, putative (207 aa)
   
0.775
PITG_11205
Rab2 family GTPase, putative (210 aa)
   
0.759
PITG_12843
Rab proteins geranylgeranyltransferase component A, putative (517 aa)
     
 
  0.755
PITG_20206
ADP-ribosylation factor family (180 aa)
     
  0.737
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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