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PITG_18976 protein (Phytophthora infestans) - STRING interaction network
"PITG_18976" - RNA binding protein, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_18976RNA binding protein, putative (222 aa)    
Predicted Functional Partners:
PITG_07306
U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative (204 aa)
       
  0.594
PITG_11805
Splicing factor, arginine/serine-rich, putative (214 aa)
       
  0.591
PITG_03763
Pre-mRNA-splicing factor SF2-like protein (184 aa)
       
  0.591
PITG_03028
Pre-mRNA-splicing factor SF2 (297 aa)
       
  0.591
PITG_17157
Putative uncharacterized protein (286 aa)
       
  0.528
PITG_10600
Putative uncharacterized protein (373 aa)
       
  0.528
PITG_08932
Putative uncharacterized protein (382 aa)
       
  0.528
PITG_06868
RNA-binding protein, putative (382 aa)
       
  0.528
PITG_02629
Nucleolin, putative (496 aa)
       
  0.528
PITG_02067
Pre-mRNA-splicing factor cwc2, putative (448 aa)
       
  0.528
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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