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PITG_20193 protein (Phytophthora infestans) - STRING interaction network
"PITG_20193" - Rab5 family GTPase, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_20193Rab5 family GTPase, putative (194 aa)    
Predicted Functional Partners:
PITG_12810
Putative uncharacterized protein (472 aa)
       
 
  0.915
PITG_10345
Putative uncharacterized protein (539 aa)
       
 
  0.915
PITG_02290
Putative uncharacterized protein (587 aa)
       
  0.879
PITG_18735
Vacuolar protein sorting-associated protein, putative (623 aa)
     
  0.731
PITG_03873
Rab GDP dissociation inhibitor alpha (462 aa)
     
 
  0.726
PITG_02022
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1719 aa)
       
  0.691
PITG_17455
Vacuolar protein sorting-associating protein, putative (460 aa)
     
 
  0.690
PITG_17835
Putative uncharacterized protein (102 aa)
     
 
  0.681
PITG_17076
Putative uncharacterized protein (557 aa)
     
  0.667
PITG_12915
Sorting nexin, putative (527 aa)
     
  0.667
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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