STRINGSTRING
PITG_20194 protein (Phytophthora infestans) - STRING interaction network
"PITG_20194" - Protein mago nashi in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_20194Protein mago nashi (158 aa)    
Predicted Functional Partners:
PITG_08765
RNA binding protein, putative (166 aa)
     
  0.998
PITG_21219
Putative uncharacterized protein (453 aa)
     
  0.968
PITG_19129
ATP-dependent RNA helicase eIF4A, putative (411 aa)
     
  0.964
PITG_17460
DEAD/DEAH box RNA helicase, putative (351 aa)
     
  0.964
PITG_03568
DEAD/DEAH box RNA helicase, putative (455 aa)
     
  0.885
PITG_06048
Eukaryotic initiation factor 4A-III, putative (406 aa)
     
  0.856
PITG_09942
DEAD/DEAH box RNA helicase, putative (470 aa)
     
  0.804
PITG_09792
DEAD/DEAH box RNA helicase, putative (666 aa)
     
  0.804
PITG_06827
DEAD/DEAH box RNA helicase, putative (681 aa)
     
  0.804
PITG_02677
DEAD/DEAH box RNA helicase, putative (554 aa)
     
  0.804
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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